Some BioMAJ users :
- GenOuest (Rennes)
- Institut Français de Bioinformatique (IFB)
- Plate-forme protéomique (Rennes)
- Genotoul (Toulouse)
- MIGALE (Jouy-en-Josas)
- ABiMS (Roscoff)
- IBCP (Lyon)
- PBIL (Lyon)
- IPHC (Strasbourg)
- Institut Pasteur
- Ifremer
Some tools or resources integrating BioMAJ :
- PopGenIE (Umeå)1
- Kipper2
- Galaxy3
- AMYPdb4
- GAG5
- AnnotQTL6
- DGD7
- Crispi
Using BioMAJ? To be mentioned contact us.
1.
Sjödin A, Street N, Sandberg G, Gustafsson P, Jansson S. The Populus Genome Integrative Explorer (PopGenIE): a new resource for exploring the Populus genome. New Phytol. 2009;182(4):1013-1025. [PubMed]
2.
Dooley D, Petkau A, Van D, Hsiao W. Sequence database versioning for command line and Galaxy bioinformatics servers. Bioinformatics. 2016;32(8):1275-1277. [PubMed]
3.
Bretaudeau A, Monjeaud C, Le B, Legeai F, Collin O. BioMAJ2Galaxy: automatic update of reference data in Galaxy using BioMAJ. Gigascience. 2015;4:22. [PubMed]
4.
Pawlicki S, Le B, Delamarche C. AMYPdb: a database dedicated to amyloid precursor proteins. BMC Bioinformatics. 2008;9:273. [PubMed]
5.
Obadia T, Sallou O, Ouedraogo M, Guernec G, Lecerf F. The GAG database: a new resource to gather genomic annotation cross-references. Gene. 2013;527(2):503-509. [PubMed]
6.
Lecerf F, Bretaudeau A, Sallou O, et al. AnnotQTL: a new tool to gather functional and comparative information on a genomic region. Nucleic Acids Res. 2011;39(Web Server issue):W328-33. [PubMed]
7.
Ouedraogo M, Bettembourg C, Bretaudeau A, et al. The duplicated genes database: identification and functional annotation of co-localised duplicated genes across genomes. PLoS One. 2012;7(11):e50653. [PubMed]