How to install biomaj?
Create your BioMAJ directories:
mkdir biomaj mkdir biomaj/conf mkdir biomaj/lock mkdir biomaj/db mkdir biomaj/process mkdir biomaj/cache mkdir biomaj/log
Create a Python virtual environment to install BioMAJ and every associated package:
Every time you will want to use BioMAJ you will have to activate the Python virtual environment:
Pip and requests installation:
pip install --upgrade pip easy_install pip pip uninstall requests easy_install requests
Installation of all required packages for BioMAJ:
cd biomaj pip install -r requirements.txt apt-get install libssl-dev libcurl4-openssl-dev python-dev easy_install pycurl cd ..
Installation of the BioMAJ packages:
pip install biomaj-cli pip install biomaj-daemon pip install biomaj-user pip install biomaj-download pip install biomaj-process pip install biomaj-cron pip install biomaj-ftp
For biomaj-watcher :
git clone https://github.com/genouest/biomaj-watcher cd biomaj-watcher python setup.py develop
You are ready to start, go to Tutorial.