Welcome on Biomaj user interface
| Release | 2007-07-03 | ||||
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| BankSize | 4,431G | ||||
| Downloaded files size | 514,544M | ||||
| Elapsed time | 00:31:40 | ||||
| Online Directory | /db/ncbi/genomes/Ornithorhynchus_anatinus/Ornithorhynchus_anatinus_2007-07-03 | ||||
| Start | End | Elapsed Time | Nb Files | Status | |
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| session | 20-12-2007 16:33:59 | 20-12-2007 17:05:40 | 00:31:40 | download=1/ Extract=0/ Local=0 |  |
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warning
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Offline directory does not exist, Biomaj will create it. (value:/db/biomaj/ncbi/genomes/Ornithorhynchus_anatinus_tmp)
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warning
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Production directory does not exist, Biomaj will create it. (value:/db//ncbi/genomes/Ornithorhynchus_anatinus)
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warning
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No parallel process defined! (db.pre.process not set)
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(Local => files from preview release)
| Meta Process : POST1 (duration : 00:00:01) |
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| PP Name | description | cmd | Elabs. Time | Status |
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| multipleLink | Link all chromosomes | multiplelinkfile.sh 'flat/CHR*/*.fa' 1 'fasta' | El.Time.: 00:00:01 | |
| Meta Process : POST2 (duration : 00:02:55) |
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| PP Name | description | cmd | Elabs. Time | Status |
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| concat | concat fasta files | concat.sh "flat/CHR*/*.fa" "" "fasta/All/all.fasta" | El.Time.: 00:00:39 | |
| PP Name | description | cmd | Elabs. Time | Status |
|---|---|---|---|---|
| formatdb | Index blast | formatdb.sh "fasta/All/all.fasta" "blast/All/" "-p F -o T" Ornithorhynchus_anatinus | El.Time.: 00:02:55 | |