Welcome on Biomaj user interface
| Release | 2007-03-02 | ||||
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| BankSize | 7,605G | ||||
| Downloaded files size | |||||
| Elapsed time | 00:12:13 | ||||
| Online Directory | /db/ncbi/genomes/Monodelphis_domestica/Monodelphis_domestica_2007-03-02 | ||||
| Start | End | Elapsed Time | Nb Files | Status | |
|---|---|---|---|---|---|
| session | 18-12-2007 10:04:32 | 18-12-2007 10:06:40 | 00:02:08 | download=0/ Extract=0/ Local=0 |  |
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warning
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No parallel process defined! (db.pre.process not set)
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error
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I/O error, message:java.io.IOException: Fatal thread interruption during read. See the logs to obtain more information.
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error
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A problem occurs during the execution of biomaj:java.lang.NumberFormatException: null
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error
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Biomaj stopped. See the logs to obtain more information.
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| session | 18-12-2007 10:06:54 | 18-12-2007 10:16:45 | 00:09:50 | download=0/ Extract=0/ Local=0 |  |
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warning
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New production directory is smallest than the old [new size:8150794330] [old size:16713252864]
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(Local => files from preview release)
| Meta Process : POST1 (duration : 00:00:00) |
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| PP Name | description | cmd | Elabs. Time | Status |
|---|---|---|---|---|
| multipleLink | Link all chromosomes | multiplelinkfile.sh 'flat/CHR*/*.fa' 1 'fasta' | El.Time.: 00:00:00 | |
| Meta Process : POST2 (duration : 00:03:58) |
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| PP Name | description | cmd | Elabs. Time | Status |
|---|---|---|---|---|
| concat | concat fasta files | concat.sh "flat/CHR*/*.fa" "" "fasta/All/all.fasta" | El.Time.: 00:02:32 | |
| PP Name | description | cmd | Elabs. Time | Status |
|---|---|---|---|---|
| formatdb | Index blast | formatdb.sh "fasta/All/all.fasta" "blast/All/" "-p F -o T" Monodelphis_domestica | El.Time.: 00:03:58 | |