| DB name |
Description |
Files
|
Av. Freq. Update |
Current Release |
| Anopheles_gambiae |
"Genome Anopheles gambiae (NCBI)" |
|
09:19:21 |
2008-01-09 |
| Apis_mellifera |
"Genome Apis mellifera (NCBI)" |
|
09:01:13 |
2006-08-03 |
| Arabidopsis_thaliana |
"Genome d'Arabidopsis thaliana(NCBI)" |
|
09:14:00 |
2007-04-24 |
| Bos_taurus |
"Genome Bos taurus (NCBI)" |
|
01:19:35 |
2006-12-27 |
| Caenorhabditis_elegans |
"Genome Caenorhabditis elegans (NCBI)" |
|
01:39:30 |
2006-02-16 |
| Canis_familiaris |
"Genome Canis familiaris (NCBI)" |
|
12:33:36 |
2005-09-01 |
| D_rerio |
"Genome Danio rerio (NCBI)" |
|
00:31:24 |
2007-02-22 |
| Drosophila_melanogaster |
"Genome Drosophila melanogaster (NCBI)" |
|
05:21:33 |
2006-11-28 |
| Equus_caballus |
"Genome Equus caballus (domestic horse) (NCBI)" |
|
00:09:47 |
2007-07-02 |
| Fungi |
"Genomes Fungi (NCBI)" |
|
17:08:11 |
2008-01-07 |
| Gallus_gallus |
"Genome Gallus gallus (NCBI)" |
|
16:42:42 |
2006-11-27 |
| H_sapiens |
"Genome Homo sapiens (NCBI)" |
|
18:15:18 |
2006-09-03 |
| M_musculus |
"Genome Mus musculus (NCBI)" |
|
22:16:01 |
2007-06-26 |
| Macaca_mulatta |
"Genome Macaca mulatta (NCBI)" |
|
03:59:02 |
2006-06-19 |
| Monodelphis_domestica |
"Genome Monodelphis domestica (NCBI)" |
|
06:52:15 |
2007-03-02 |
| Nasonia_vitripennis |
"Genome Nasonia vitripennis (jewel wasp)(NCBI)" |
|
00:00:00 |
2007-09-07 |
| Ornithorhynchus_anatinus |
"Genome Ornithorhynchus anatinus (platypus) (NCBI)" |
|
00:00:00 |
2007-07-03 |
| Pan_troglodytes |
"Genome Pan troglodytes (NCBI)" |
|
16:17:44 |
2006-09-25 |
| Plasmodium_falciparum |
"Genome Plasmodium falciparum (NCBI)" |
|
17:11:21 |
2007-07-24 |
| R_norvegicus |
"Genome Rattus norvegicus (NCBI)" |
|
08:40:06 |
2006-07-05 |
| Saccharomyces_cerevisiae |
"Genome Saccharomyces cerevisiae (NCBI)" |
|
18:08:13 |
2007-12-17 |
| Schizosaccharomyces_pombe |
"Genome Schizosaccharomyces_pombe (NCBI)" |
|
17:08:58 |
2002-03-05 |
| Strongylocentrotus_purpuratus |
"Genome Strongylocentrotus purpuratus (NCBI)" |
|
14:38:14 |
2006-10-13 |
| Tribolium_castaneum |
"Genome Tribolium castaneum (NCBI)" |
|
06:22:52 |
2006-04-10 |
| astral |
"The ASTRAL Compendium for Sequence and Structure Analysis" |
|
00:00:00 |
2007-01-24 |
| canFam2 |
the assembly of the dog genome (UCSC version canFam2) produced by the Broad Institute at MIT. |
|
10:44:54 |
2007-03-09 |
| danRer5 |
assembly of the zebrafish genome (danRer5) obtained from the Wellcome Trust Sanger Institute. |
|
00:17:41 |
2007-09-14 |
| dbest |
"dbEST (Nature Genetics 4:332-3;1993) is a division of GenBank that contains sequence data and other information on single-pass
cDNA sequences, or Expressed Sequence Tags, from a number of organisms."
|
|
04:45:33 |
2007-12-18 |
| enzyme |
"ENZYME : the repository of information relative to the nomenclature of enzymes" |
|
22:52:15 |
04-Dec-2007 |
| estMM8_HG18_CANFAM2 |
"EST : Dog (Canis familiaris), Human (Homo Sapiens), Mouse (Mus musculus)" |
|
20:03:20 |
2007-10-14 |
| gasAcu1 |
assembly of the stickleback genome (gasAcu1, Broad Institute gasAcu1 (1.0)). |
|
00:00:00 |
2006-08-16 |
| genbankRelease |
"Genbank Release is the NIH genetic sequence database, an annotated collection of all publicly available DNA sequences" |
|
22:06:42 |
163 |
| geneontology |
Gene Ontologie |
|
00:13:43 |
2007-12-23 |
| genomesBacteria |
"complete genomes/chromosomes, contigs, and reference sequence mRNAs and proteins" |
|
06:58:34 |
2008-01-15 |
| hg18 |
The Build 36.1 finished human genome assembly (hg18, Mar. 2006). The chromosomal sequences were assembled by the International
Human Genome Project sequencing centers.
|
|
02:37:11 |
2005-12-09 |
| imgt |
"IMGT, the international ImMunoGeneTics information system." |
|
02:26:15 |
200801-6 |
| kegg |
The KEGG Markup Language (KGML) |
|
23:08:47 |
2008-01-12 |
| mm8 |
the Build 36 "essentially finished" mouse genome (UCSC mm8, February 2006) from the Mouse Genome Sequencing Consortium. This
assembly was produced at NCBI.
|
|
22:36:37 |
2006-05-09 |
| nr |
"non-redundant protein sequence database with entries from GenPept, Swissprot, PIR, PDF, PDB and RefSeq" |
|
03:18:50 |
2008-01-10 |
| nt |
"nucleotide sequence database, with entries from all traditional divisions of GenBank, EMBL and DDBJ excluding bulk divisions
(gss, sts, pat, est, htg divisions) and wgs entries. Not non-redundant"
|
|
02:38:49 |
2008-01-10 |
| oryLat1 |
the assembly of the medaka genome (oryLat1, MEDAKA1) produced by Institute of Genetics (NIG). |
|
00:21:05 |
2005-12-06 |
| pfam |
"PFAM : Multiple alignments and profile HMMs of protein domains" |
|
01:42:16 |
22.0 |
| refseq_genomic |
"refseq Index blast" |
|
21:48:05 |
2008-01-09 |
| refseq_protein |
"refseq Index blast" |
|
05:09:33 |
2008-01-09 |
| refseq_rna |
"refseq Index blast" |
|
17:58:30 |
2008-01-09 |
| sts |
"Database for sequence tag site entries" |
|
12:41:57 |
2008-01-09 |
| tetNig1 |
freeze of the Tetraodon nigroviridis version 7 (V7) genome assembly (tetNig1) provided by Genoscope (http://www.genoscope.cns.fr/). |
|
20:13:26 |
2004-09-08 |
| unigene |
"UniGene: An Organized View of the Transciptome." |
|
10:48:53 |
2008-01-09 |
| uniprot |
"UniProt (Universal Protein Resource) is the world's most comprehensive catalog of information on proteins. It is a central
repository of protein sequence and function created by joining the information contained in Swiss-Prot, TrEMBL, and PIR."
|
|
16:03:06 |
12.6 |
